PlantTFDB
Plant Transcription Factor Database
v4.0
Previous version: v3.0
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID Lus10027413
Organism
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Malpighiales; Linaceae; Linum
Family ERF
Protein Properties Length: 185aa    MW: 19556.8 Da    PI: 4.5556
Description ERF family protein
Gene Model
Gene Model ID Type Source Coding Sequence
Lus10027413genomeBGIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1AP253.55.8e-173077355
          AP2  3 ykGVrwdkkrgrWvAeIrdpsengkrkrfslgkfgtaeeAakaaiaarkkleg 55
                 ykGVr +  +g+Wv+eIr+p++   ++r++lg++ t+e+Aa+a++ a+ +l+g
  Lus10027413 30 YKGVRIR--SGKWVSEIREPKK---TTRIWLGTYPTPEMAAAAYDVAAIALKG 77
                 9***965..5*********854...5***********************9988 PP

Protein Features ? help Back to Top
3D Structure
Database Entry ID E-value Start End InterPro ID Description
SuperFamilySSF541711.44E-182887IPR016177DNA-binding domain
Gene3DG3DSA:3.30.730.104.7E-262986IPR001471AP2/ERF domain
PROSITE profilePS5103219.9682985IPR001471AP2/ERF domain
SMARTSM003803.0E-272991IPR001471AP2/ERF domain
PfamPF008473.4E-103077IPR001471AP2/ERF domain
CDDcd000186.88E-173087No hitNo description
Gene Ontology ? help Back to Top
GO Term GO Category GO Description
GO:0006355Biological Processregulation of transcription, DNA-templated
GO:0003677Molecular FunctionDNA binding
GO:0003700Molecular Functiontranscription factor activity, sequence-specific DNA binding
Sequence ? help Back to Top
Protein Sequence    Length: 185 aa     Download sequence    Send to blast
MAANKPDHPP PQPTQPAQSS SSTPSPASMY KGVRIRSGKW VSEIREPKKT TRIWLGTYPT  60
PEMAAAAYDV AAIALKGRET LLNFPSSIGS YPTPASTSPS DIRAAAHTAA AALVAPKPSS  120
GQASGEGRNL EEYMDVEDVL DMPNLLVEMA GGLMVSPPRM GDATLYGDSP DNSEGESLWS  180
YDEY*
Regulation -- PlantRegMap ? help Back to Top
Source Upstream Regulator Target Gene
PlantRegMapRetrieve-
Annotation -- Protein ? help Back to Top
Source Hit ID E-value Description
RefseqXP_002304466.13e-55AP2 domain-containing family protein
SwissprotQ9FJ904e-44ERF25_ARATH; Ethylene-responsive transcription factor ERF025
TrEMBLB9GW613e-55B9GW61_POPTR; AP2 domain-containing family protein
STRINGPOPTR_0003s12120.19e-55(Populus trichocarpa)
Orthologous Group ? help Back to Top
LineageOrthologous Group IDTaxa NumberGene Number
FabidsOGEF56232144
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT5G52020.15e-40ERF family protein